The distinctive features of the Lower Devonian rocks of the Longmenshan area in southwestern China are brachiopod shell concentrations, especially in the Bailiuping, Ganxi and Xiejiawan Formations, where brachiopod shell concentrations occur widely throughout. Depending on the dominant skeletal elements, six types of shell concentrations can be distinguished: Protochonete, Acrospirifer, Howellella, Orientospirifer, polyspecific shell and polyspecific fragments concentrations. According to the shell features, taphonomic signature, host sediments and their relationships, four genetic models of the various shell concentrations are described in this paper. The genetic processes and distributions along an onshore–offshore area were clarified on the base of taphonomic analysis. Pavements of opportunistic species of Protochonetes are autochthonous assemblages living in quieter, deeper, more offshore waters near the maximum storm wave base. The pavements are the result of reduced sedimentation; the substrate was silty and water-saturated with variable turbidity soupy-mud. Transport by high-energy processes is interpreted as the final formation process of polyspecific fragments concentrations with most extensive scope from intertidal zone to the maximum storm wave base. The Acrospirifer, Howellella, and Orientospirifer concentrations have been stirred by storm wave action and quickly buried after short transport tempestite model. They are most easily preserved around the average storm wave-base. The polyspecific shell concentrations, which include large bivalves are autochthonous assemblages living in shallow and relatively quieter water near shore environments.